Bioinformatics data skills /
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Main Authors: | |
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Published: |
O'Reilly,
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Publisher Address: | Sebastopol : |
Publication Dates: | 2015. |
Literature type: | Book |
Language: | English |
Subjects: | |
Carrier Form: | xxv, 507 pages : illustrations ; 24 cm |
Bibliography: | Includes bibliographical references and index. |
ISBN: | 9781449367374 (paperback) : |
Index Number: | QH324 |
CLC: | Q811.4 |
Call Number: | Q811.4/B929 |
Contents: | Ideology : data skills for robust and reproducible bioinformatics. How to learn bioinformatics -- Prerequisites : essential skills for getting started with a bioinformatics project. Setting up and managing a bioinformatics project -- Remedial Unix shell -- Working with remote machines -- Git for scientists -- Bioinformatics data -- Practice : bioinformatics data skills. Unix data tools -- A rapid introduction to the R language -- Working with range data -- Working with sequence data -- Working with alignment data -- Bioinformatics shell scripting, writing pipelines, and parallelizing tasks -- Out-of-memory approaches : Tabix and SGLite. |