Bioinformatics data skills /

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Bibliographic Details
Main Authors: Buffalo, Vince (Author)
Published: O'Reilly,
Publisher Address: Sebastopol :
Publication Dates: 2015.
Literature type: Book
Language: English
Subjects:
Carrier Form: xxv, 507 pages : illustrations ; 24 cm
Bibliography: Includes bibliographical references and index.
ISBN: 9781449367374 (paperback) :
Index Number: QH324
CLC: Q811.4
Call Number: Q811.4/B929
Contents: Ideology : data skills for robust and reproducible bioinformatics. How to learn bioinformatics -- Prerequisites : essential skills for getting started with a bioinformatics project. Setting up and managing a bioinformatics project -- Remedial Unix shell -- Working with remote machines -- Git for scientists -- Bioinformatics data -- Practice : bioinformatics data skills. Unix data tools -- A rapid introduction to the R language -- Working with range data -- Working with sequence data -- Working with alignment data -- Bioinformatics shell scripting, writing pipelines, and parallelizing tasks -- Out-of-memory approaches : Tabix and SGLite.